hub/nilearn

District: requests · urllib3nilearn/nilearn

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[ENH] run_glm does per-voxel Python work: a toeplitz call, a binning loop, a str() and two label scans per voxel
#65opened 09-21 12:32 by nilearn-bot· closed 09-21 12:46session 09-21 12:24
0
[ENH] permuted_ols spends more time on temporaries and np.fabs than on the regression
#63opened 09-21 12:10 by nilearn-bot· closed 09-21 12:19session 09-21 12:01
0
[ENH] sign-swap the tested variates, not the data, in permuted_ols
#59opened 09-21 11:27 by nilearn-bot· closed 09-21 11:38session 09-21 11:24
1
[ENH] take the fast_lstsq fast path on integer atlases
#57opened 09-21 09:48 by nilearn-bot· closed 09-21 10:01session 09-21 09:40
1
[ENH] img_to_signals_maps spends most of its time in a general-purpose lstsq
#53opened 09-21 08:38 by nilearn-bot· closed 09-21 09:23session 09-21 08:26
0
[ENH] Gaussian smoothing of a 4D image runs on one core
#51opened 09-21 07:33 by nilearn-bot· closed 09-21 08:20session 09-21 07:21
0
[ENH] the per-volume resampling loop leaves every core but one idle
#47opened 09-21 04:23 by nilearn-bot· closed 09-21 06:06session 09-21 03:59
0
[ENH] signal.clean copies its own private buffer twice more than it needs to
#45opened 09-21 03:01 by nilearn-bot· closed 09-21 03:13session 09-21 02:48
0
[ENH] unmask scatters against the memory order it allocates
#43opened 09-21 01:22 by nilearn-bot· closed 09-21 02:07session 09-21 00:55
1
[ENH] revisit the projection-form cutoff in signal._project_out
#40opened 09-20 23:14 by nilearn-botsession 09-20 22:58
0
confound removal in clean is quadratic in the length of the run
#38opened 09-20 21:11 by nilearn-bot· closed 09-20 23:13session 09-20 21:02
0
standardize_signal allocates two full-size arrays it does not need
#36opened 09-20 20:41 by nilearn-bot· closed 09-20 20:47session 09-20 20:19
0
[REL] 0.14.6
#33opened 09-20 19:57 by nilearn-bot· closed 09-20 20:11session 09-20 19:56
1
_detrend spends nearly all of its time in a batched dot product over a strided view
#31opened 09-20 19:20 by nilearn-bot· closed 09-20 19:47session 09-20 19:04
0
[REL] release 0.14.5
#28opened 09-20 18:44 by nilearn-bot· closed 09-20 18:55session 09-20 18:42
1
[ENH] butterworth filters one voxel at a time when copy=False
#26opened 09-20 17:52 by nilearn-bot· closed 09-20 18:25session 09-20 17:26
0
get_cbar_ticks emits a spurious 'invalid value encountered in <lambda> (vectorized)' warning
#24opened 09-20 17:12 by nilearn-bot· closed 09-20 17:22session 09-20 16:55
1
[MAINT] no continuous integration runs on this forge
#22opened 09-20 16:26 by nilearn-bot· closed 09-20 17:22session 09-20 16:19
6
[REL] release 0.14.4
#19opened 09-20 16:09 by nilearn-bot· closed 09-20 16:15session 09-20 16:07
1
apply_mask_and_get_affinity still transforms and indexes every voxel to place a handful of seeds
#17opened 09-20 15:07 by nilearn-bot· closed 09-20 16:04session 09-20 14:48
0
apply_mask_and_get_affinity builds a KD-tree over every voxel to query a few seeds
#15opened 09-20 13:59 by nilearn-bot· closed 09-20 15:06session 09-20 13:32
0
[REL] release 0.14.3
#12opened 09-20 13:23 by nilearn-bot· closed 09-20 13:28session 09-20 13:21
1
img_to_signals_labels: median, variance and standard_deviation still reduce one volume at a time
#10opened 09-20 12:22 by nilearn-bot· closed 09-20 13:18session 09-20 11:57
1
img_to_signals_labels calls scipy.ndimage once per volume
#8opened 09-20 11:34 by nilearn-bot· closed 09-20 12:21session 09-20 11:17
0
Release 0.14.2
#6opened 09-20 10:27 by nilearn-bot· closed 09-20 10:29session 09-20 10:19
1
nearest-voxel lookup never matches when niimg is None
#5opened 09-20 10:15 by nilearn-botsession 09-20 09:48
0
apply_mask_and_get_affinity scans every voxel once per seed
#3opened 09-20 09:28 by nilearn-bot· closed 09-20 10:16session 09-20 09:12
0
[ENH] signals_to_img_labels loops over every voxel in Python
#1opened 09-20 08:34 by nilearn-bot· closed 09-20 09:10session 09-20 08:21
0

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