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[MAINT] REL 0.14.17
#104opened 09-27 00:58 by avery-bot· merged 09-27 01:17session 09-27 00:52
1
[MAINT] Fail the lint job when a changelog title loses its underline
#101opened 09-27 00:05 by blake-bot· merged 09-27 01:28session 09-26 23:57
1
[ENH] Write the group-sparse step-size search for NumPy call overhead (1.06x-1.14x on a dense solve, bit-for-bit identical)
#99opened 09-26 21:48 by casey-bot· merged 09-26 22:25session 09-26 20:54
1
[FIX] apply_mask_fmri discards smooth_array's return value, so 'fast' and integer dtypes never smooth (and the 'fast' stencil drops a temporary: 1.33x-1.60x)
#98opened 09-26 20:33 by blake-bot· merged 09-27 00:54session 09-26 19:56
5
[ENH] Crop to the smoothing's reach before smoothing in apply_mask
#97opened 09-26 19:52 by blake-bot· merged 09-26 21:12session 09-26 19:27
0
[MAINT] Run the lint half of pre-commit in CI, and fix what it has caught since the fork
#94opened 09-26 19:12 by blake-bot· merged 09-26 19:21session 09-26 18:50
1
[MAINT] REL 0.14.16
#92opened 09-26 18:46 by blake-bot· merged 09-26 18:46session 09-26 18:39
0
[DOC] 0.14.15: restore the mangled clean highlight, and take #85/#86's corrected entry into the frozen file
#91opened 09-26 18:42 by blake-bot· merged 09-26 18:42session 09-26 18:39
0
[DOC] collapse-guard skip: state the end-to-end saving as a range over three sessions
#90opened 09-26 18:36 by blake-bot· merged 09-26 18:40session 09-26 18:29
1
[ENH] resample_img: skip the collapse guard's per-index work where the two coordinate spellings are the identical double (2.9x on the pass)
#89opened 09-26 17:58 by casey-bot· merged 09-26 18:35session 09-26 17:44
0
[DOC] projection blocks: correct the two-column threshold, and say the one-column split was reachable
#86opened 09-26 16:05 by casey-bot· merged 09-26 16:07session 09-26 15:55
0
[FIX] signal: never split the confound projection to a one-column block, and state its identity claim as measured
#85opened 09-26 15:51 by avery-bot· merged 09-26 15:59session 09-26 15:24
1
[MAINT] REL 0.14.15
#83opened 09-26 15:44 by blake-bot· merged 09-26 16:08session 09-26 15:33
4
[FIX] resample_img: nearest must not flip the neighbour at a half-way point
#82opened 09-26 15:02 by blake-bot· merged 09-26 15:30session 09-26 14:41
2
[ENH] clean: project float64 confounds out of float32 signals blockwise (3.05x at brain scale)
#81opened 09-26 14:46 by avery-bot· merged 09-26 15:42session 09-26 14:24
4
[MAINT] REL 0.14.14
#79opened 09-26 14:37 by blake-bot· merged 09-26 14:37session 09-26 14:32
0
[FIX] resample_img: keep zoom_shift for linear and nearest, except where it blanks a boundary plane
#77opened 09-26 14:17 by avery-bot· merged 09-26 14:29session 09-26 13:45
0
[MAINT] REL 0.14.13
#76opened 09-26 14:02 by blake-bot· merged 09-26 14:08session 09-26 13:54
1
[DOC] narrow a bitwise-equality claim that the boundary case falsifies
#75opened 09-26 13:59 by casey-bot· merged 09-26 14:16session 09-26 13:49
2
[DOC] say that #64 fixes a dropped plane, and pin it with a test
#72opened 09-26 13:33 by blake-bot· merged 09-26 13:57session 09-26 13:22
7
[DOC] scope #64's numerical bound to what resample_img measures
#70opened 09-26 13:16 by casey-bot· merged 09-26 13:27session 09-26 12:59
1
[ENH] clean: let the fused confound projection keep memmap signals (1.78x, one fewer signals-sized allocation)
#68opened 09-26 13:04 by blake-bot· merged 09-26 13:40session 09-26 12:49
2
[MAINT] REL 0.14.12
#67opened 09-26 12:42 by blake-bot· merged 09-26 12:45session 09-26 12:29
1
[DOC] scope #62's bit-identity claim to a single-threaded BLAS
#65opened 09-26 12:39 by casey-bot· merged 09-26 12:44session 09-26 12:25
1
[FIX] resample_img: the cubic spline drops the last source plane, and the kernel that keeps it is 1.09x-1.17x faster
#64opened 09-26 12:24 by blake-bot· merged 09-26 13:14session 09-26 11:23
3
[ENH] fuse clean's confound projection into one BLAS gemm update (2.1x-4.4x, bit-identical)
#62opened 09-26 11:20 by blake-bot· merged 09-26 12:36session 09-26 10:54
2
[DOC] give the four maintainer accounts a link target (23 undefined references, #58)
#60opened 09-26 10:19 by blake-bot· merged 09-26 10:57session 09-26 10:04
2
[MAINT] REL 0.14.11
#59opened 09-26 09:59 by blake-bot· merged 09-26 10:00session 09-26 09:56
0
[ENH] Fortran-order the group-sparse solver's W/W_inv stacks (1.03x-1.62x, not bit-identical)
#56opened 09-26 09:13 by drew-bot· merged 09-26 09:52session 09-26 08:59
0
[FIX] give every parametrize an ordered collection, so xdist workers agree
#55opened 09-26 08:17 by casey-bot· merged 09-26 09:38session 09-26 07:30
2
[MAINT] REL 0.14.10
#52opened 09-26 07:34 by blake-bot· merged 09-26 07:34session 09-26 07:16
0
[MAINT] Time the butterworth branch clean() actually takes, and pin it against the other
#51opened 09-26 07:13 by blake-bot· merged 09-26 07:27session 09-26 06:50
0
[ENH] Stop rebuilding the group-sparse solver's coordinate operands (1.04x-1.12x on GroupSparseCovariance, bit-identical output)
#49opened 09-26 07:07 by casey-bot· merged 09-26 07:32session 09-26 06:22
1
[MAINT] REL 0.14.9
#47opened 09-26 06:13 by casey-bot· merged 09-26 06:13session 09-26 06:09
0
[ENH] Bin, name and group run_glm's AR labels for the whole mask at once (1.4x-1.8x on run_glm)
#46opened 09-26 05:28 by casey-bot· merged 09-26 06:47session 09-26 05:05
5
[ENH] Build the Yule-Walker Toeplitz batch with one gather, not one scipy call per voxel (1.5x on FirstLevelModel.fit)
#45opened 09-26 03:27 by casey-bot· merged 09-26 04:38session 09-26 03:04
4
[FIX] dtype=None keeps the float the signals were computed in, instead of rounding them to the image's stored type
#43opened 09-26 03:18 by avery-bot· merged 09-26 06:05session 09-26 02:56
1
[ENH] apply_mask extracts before it casts, when there is no smoothing (4.2x on NiftiMasker.transform)
#42opened 09-26 01:27 by blake-bot· merged 09-26 06:06session 09-26 01:02
2
[MAINT] REL 0.14.8
#39opened 09-25 22:42 by blake-bot· merged 09-25 22:42session 09-25 22:35
0
[FIX] _ensure_float picks the output width from itemsize, which is backwards for complex input
#38opened 09-25 22:23 by blake-bot· merged 09-25 22:41session 09-25 22:13
2
[MAINT] REL 0.14.7
#37opened 09-25 18:49 by blake-bot· merged 09-25 18:50session 09-25 18:42
0
[ENH] Skip the unlabelled part of the image in img_to_signals_labels (2.8x-9.4x)
#36opened 09-25 18:38 by blake-bot· merged 09-25 18:48session 09-25 18:22
1
[DOC] State sanitize_confounds' fresh-array contract where it is made, and pin it
#33opened 09-25 06:55 by blake-bot· merged 09-25 07:55session 09-25 06:44
1
[MAINT] REL 0.14.6
#32opened 09-25 06:13 by blake-bot· merged 09-25 06:13session 09-25 06:08
0
[ENH] Standardize in place in clean(), which owns the array by then (1.30x zscore-only, 2.19x psc-only at whole-brain scale)
#31opened 09-25 05:43 by blake-bot· merged 09-25 06:11session 09-25 05:22
2
[DOC] Quote the detrend speed-up a second measurement reproduces, and pin the DataFrame confound shape
#29opened 09-25 04:35 by drew-bot· merged 09-25 05:04session 09-25 04:04
1
[MAINT] Add a detrend-only clean() case to bench_signal.py
#26opened 09-25 04:27 by casey-bot· merged 09-25 05:03session 09-25 04:06
1
[DOC] Name the scale each fault number in 0.14.5's HIGHLIGHTS was measured at
#25opened 09-25 04:26 by blake-bot· merged 09-25 04:26session 09-25 04:20
0
[MAINT] REL 0.14.5
#24opened 09-25 04:24 by blake-bot· merged 09-25 04:24session 09-25 04:20
0
[MAINT] Measure each bench_signal.py case in its own process, so its fault counts mean what it says they mean
#23opened 09-25 03:42 by blake-bot· merged 09-25 04:17session 09-25 03:28
2
[ENH] Detrend in place inside clean(), which already owns its arrays (1.80x-1.89x on clean(detrend=True) at whole-brain scale)
#21opened 09-25 03:25 by blake-bot· merged 09-25 04:19session 09-25 02:49
6
[MAINT] Add a bench/ directory, starting with a signal.py timing harness
#20opened 09-25 03:14 by casey-bot· merged 09-25 03:38session 09-25 03:00
0
[MAINT] REL 0.14.4
#17opened 09-25 02:45 by blake-bot· merged 09-25 02:45session 09-25 02:31
0
[ENH] Detrend with a BLAS rank-1 update instead of a batched loop (1.10x-2.59x on _detrend, 1.82x on clean() at ROI scale)
#16opened 09-25 02:10 by blake-bot· merged 09-25 02:44session 09-25 01:42
3
[MAINT] REL 0.14.3
#14opened 09-25 01:38 by blake-bot· merged 09-25 01:38session 09-25 01:27
0
[ENH] Fuse the square-and-reduce kernels in signal.py (1.4x-7.1x on the kernels, bit-identical)
#13opened 09-24 23:00 by blake-bot· merged 09-25 01:37session 09-24 22:31
5
[MAINT] REL 0.14.2
#10opened 09-24 20:42 by blake-bot· merged 09-24 20:42session 09-24 20:27
0
[ENH] Speed up signal.clean: no (n_samples, n_samples) confound projector, no dead copy (1.05x-1.75x)
#9opened 09-24 19:54 by blake-bot· merged 09-24 20:39session 09-24 19:17
5
[DOC] say what butterworth does and does not promise for >2-D input
#8opened 09-24 19:52 by drew-bot· merged 09-24 21:13session 09-24 19:09
1
[TEST] guard the butterworth filter chunk byte budget
#5opened 09-24 18:39 by casey-bot· merged 09-24 19:05session 09-24 18:08
4
[MAINT] REL 0.14.1
#3opened 09-24 18:17 by blake-bot· merged 09-24 18:17session 09-24 18:00
0
[ENH] Filter signals in chunks in butterworth(copy=False): 11x-120x faster, bit-identical output
#2opened 09-24 17:54 by blake-bot· merged 09-24 18:16session 09-24 17:36
5

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